软件包：estscan（3.0.3-6 以及其他的）

[ 源代码： estscan  ]

ORF-independent detector of coding DNA sequences

ESTScan is a program that can detect coding regions in DNA sequences, even if they are of low quality. ESTScan will also detect and correct sequencing errors that lead to frameshifts. ESTScan is not a gene prediction program , nor is it an open reading frame detector. In fact, its strength lies in the fact that it does not require an open reading frame to detect a coding region. As a result, the program may miss a few translated amino acids at either the N or the C terminus, but will detect coding regions with high selectivity and sensitivity.

ESTScan takes advantages of the bias in hexanucleotide usage found in coding regions relative to non-coding regions. This bias is formalized as an inhomogeneous 3-periodic fifth-order Hidden Markov Model (HMM). Additionally, the HMM of ESTScan has been extended to allows insertions and deletions when these improve the coding region statistics.

其他与 estscan 有关的软件包

• dep: libc6 (>= 2.29) [除 alpha, arm64, ia64, riscv64, sh4]

  GNU C 语言运行库：共享库
  同时作为一个虚包由这些包填实： libc6-udeb

  dep: libc6 (>= 2.31) [sh4]

  dep: libc6 (>= 2.34) [arm64, riscv64]

• dep: libc6.1 (>= 2.29) [alpha]

  GNU C 语言运行库：共享库
  同时作为一个虚包由这些包填实： libc6.1-udeb

  dep: libc6.1 (>= 2.31) [ia64]

• dep: libgcc-s1 (>= 3.5) [armel, armhf]

  GCC 支持库

  dep: libgcc-s1 (>= 4.2) [ia64]

• dep: libgfortran5 (>= 8)

  Runtime library for GNU Fortran applications

• dep: perl

  拉里 沃尔的实用报表提取语言(Perl)

下载 estscan

下载可用于所有硬件架构的

硬件架构	版本	软件包大小	安装后大小	文件
alpha （非官方移植版）	3.0.3-6	56.1 kB	257.0 kB	[文件列表]
amd64	3.0.3-6	52.5 kB	257.0 kB	[文件列表]
arm64	3.0.3-6+b1	51.5 kB	434.0 kB	[文件列表]
armel	3.0.3-6	51.4 kB	237.0 kB	[文件列表]
armhf	3.0.3-6	49.6 kB	221.0 kB	[文件列表]
hppa （非官方移植版）	3.0.3-6	53.1 kB	241.0 kB	[文件列表]
i386	3.0.3-6	52.7 kB	253.0 kB	[文件列表]
ia64 （非官方移植版）	3.0.3-6	61.7 kB	287.0 kB	[文件列表]
m68k （非官方移植版）	3.0.3-6	49.9 kB	237.0 kB	[文件列表]
mips64el	3.0.3-6	53.6 kB	256.0 kB	[文件列表]
ppc64 （非官方移植版）	3.0.3-6	55.2 kB	433.0 kB	[文件列表]
ppc64el	3.0.3-6	54.8 kB	433.0 kB	[文件列表]
riscv64	3.0.3-6+b1	52.0 kB	234.0 kB	[文件列表]
s390x	3.0.3-6	51.9 kB	245.0 kB	[文件列表]
sh4 （非官方移植版）	3.0.3-6	54.8 kB	225.0 kB	[文件列表]
sparc64 （非官方移植版）	3.0.3-6	51.0 kB	258.0 kB	[文件列表]
x32 （非官方移植版）	3.0.3-6	51.4 kB	249.0 kB	[文件列表]