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软件包：r-bioc-pwalign（1.2.0-2） [debports]
Perform pairwise sequence alignments
The two main functions in the package are pairwiseAlignment() and stringDist(). The former solves (Needleman-Wunsch) global alignment, (Smith-Waterman) local alignment, and (ends-free) overlap alignment problems. The latter computes the Levenshtein edit distance or pairwise alignment score matrix for a set of strings.
其他与 r-bioc-pwalign 有关的软件包
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- dep: libc6.1 (>= 2.1.3)
- GNU C 语言运行库：共享库
同时作为一个虚包由这些包填实： libc6.1-udeb
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- dep: r-api-4.0
- 本虚包由这些包填实： r-base-core
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- dep: r-api-bioc-3.20
- 本虚包由这些包填实： r-bioc-biocgenerics
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- dep: r-bioc-biocgenerics
- generic functions for Bioconductor
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- dep: r-bioc-biostrings (>= 2.71.5)
- GNU R string objects representing biological sequences
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- dep: r-bioc-iranges
- GNU R low-level containers for storing sets of integer ranges
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- dep: r-bioc-s4vectors
- BioConductor S4 implementation of vectors and lists
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- dep: r-bioc-xvector
- BioConductor representation and manpulation of external sequences
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- sug: r-cran-runit
- GNU R package providing unit testing framework