[ 源代码： bali-phy ]
软件包：bali-phy（4.0~beta16+dfsg-1）
bali-phy 的相关链接
Debian 的资源：
下载源码包 bali-phy：
- [bali-phy_4.0~beta16+dfsg-1.dsc]
- [bali-phy_4.0~beta16+dfsg.orig.tar.xz]
- [bali-phy_4.0~beta16+dfsg-1.debian.tar.xz]
维护小组：
外部的资源：
- 主页 [www.bali-phy.org]
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警告：这个软件包来自于 experimental 发行版。这表示它很有可能表现出不稳定或者出现 bug ，甚至是导致资料损失。请务必在使用之前查阅 changelog 以及其他潜在的文档。
Bayesian Inference of Alignment and Phylogeny
BAli-Phy estimates multiple sequence alignments and evolutionary trees from unaligned DNA, amino acid, or codon sequences. BAli-Phy uses MCMC to estimate evolutionary trees, positive selection, and branch lengths while averaging over alternative alignments. BAli-Phy can display alignment ambiguity graphically in an alignment uncertainty (AU) plot.
BAli-Phy can also estimate phylogenies from a fixed alignment (like MrBayes and BEAST) using substitution models like GTR+gamma. BAli-Phy automatically estimates relative rates for each gene.
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