软件包：profbval（1.0.22-6）
profbval 的相关链接
Debian 的资源：
下载源码包 profbval：
维护小组：
- Debian Med Packaging Team (QA 页面, 邮件存档)
- Laszlo Kajan (QA 页面)
- Christof Angermüller (QA 页面)
- Andreas Tille (QA 页面)
外部的资源：
- 主页 [www.rostlab.org]
相似软件包：
predictor of flexible/rigid protein residues from sequence
PROFbval can be useful for both protein structure and function predictions. For instance, a biologist can locate potentially antigenic determinants by identifying the most flexible residues on the protein surface. Additionally, a crystallographer can locate residues that potentially have high experimental B-values.
PROFbval takes the following input, further described on profbval(1):
* a protein sequence in a FASTA file * secondary structure and solvent accessibility prediction by prof(1) * an HSSP file
Background: the mobility of a given residue on the protein surface is related to its functional role. Therefore, identification of extremely rigid or flexible residues on the protein surface is helpful for identifying functionally important residues in proteins. A common measure of atom mobility in proteins is B-value data from x-ray crystallography structures. PROFbval is the first tool to predict normalized backbone B-values from amino-acid sequence.
其他与 profbval 有关的软件包
|
|
|
|
-
- dep: perl
- 拉里 沃尔的实用报表提取语言(Perl)
-
- dep: profnet-bval
- neural network architecture for profbval
-
- rec: blast2
- transitional dummy package to ncbi-blast+-legacy
-
- rec: librg-utils-perl
- parsers and format conversion utilities used by (e.g.) profphd
-
- rec: profphd
- secondary structure and solvent accessibility predictor
-
- sug: pp-popularity-contest
- PredictProtein popularity contest