软件包：phyx（0.999+ds-1）
UNIX-style phylogenetic analyses on trees and sequences
phyx provides a convenient, lightweight and inclusive toolkit consisting of programs spanning the wide breadth of programs utilized by researchers performing phylogenomic analyses. Modeled after Unix/GNU/Linux command line tools, individual programs perform a single task and operate on standard I/O streams. A result of this stream-centric approach is that, for most programs, only a single sequence or tree is in memory at any moment. Thus, large datasets can be processed with minimal memory requirements. phyx’s ever-growing complement of programs consists of over 35 programs focused on exploring, manipulating, analyzing and simulating phylogenetic objects (alignments, trees and MCMC logs). As with standard Unix command line tools, these programs can be piped (together with non-phyx tools), allowing the easy construction of efficient analytical pipelines.
其他与 phyx 有关的软件包
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- dep: libarmadillo9 (>= 1:9.100.5+dfsg)
- streamlined C++ linear algebra library
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- dep: libblas3
- Basic Linear Algebra Reference implementations, shared library
- 或者 libblas.so.3
- 本虚包由这些包填实： libatlas3-base, libblas3, libblis2-openmp, libblis2-pthread, libblis2-serial, libopenblas-base
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- dep: libc6 (>= 2.23)
- GNU C 语言运行库：共享库
同时作为一个虚包由这些包填实： libc6-udeb
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- dep: libgcc1 (>= 1:3.0) [amd64]
- GCC 支持库
- dep: libgcc1 (>= 1:3.5) [armhf]
- dep: libgcc1 (>= 1:4.2) [arm64, i386]
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- dep: libgomp1 (>= 4.9)
- GCC OpenMP（GOMP）支持库
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- dep: liblapack3
- Library of linear algebra routines 3 - shared version
- 或者 liblapack.so.3
- 本虚包由这些包填实： libatlas3-base, liblapack3, libopenblas-base
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- dep: libnlopt-cxx0
- nonlinear optimization library (C++ interface)
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- dep: libnlopt0 (>= 2.2.4)
- nonlinear optimization library
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- dep: libstdc++6 (>= 5.2)
- GNU 标准 C++ 库，第3版