软件包：cain（1.10+dfsg-3）
simulations of chemical reactions
Cain performs stochastic and deterministic simulations of chemical reactions. It can spawn multiple simulation processes to utilize multi-core computers. It stores models, methods, and simulation output (populations and reaction counts) in an XML format. In addition, SBML models can be imported and exported. The models and methods can be read from input files or edited within the program.
The GUI (Graphical User Interface) is written in Python and uses the wxPython toolkit. Most of the solvers are implemented as command line executables, written in C++, which are driven by Cain. This makes it easy to launch batch jobs. It also simplifies the process of adding new solvers. Cain offers a variety of solvers:
* Gillespie's direct method. * Gillespie's first reaction method. * Gibson and Bruck's next reaction method. * Tau-leaping. * Hybrid direct/tau-leaping. * ODE integration.
This package provides the architecture independent files for cain
其他与 cain 有关的软件包
|
|
|
|
-
- dep: cain-solvers
- solvers for cain
-
- dep: python
- 交互式高级面向对象语言（Python2 版本）
- dep: python (<< 3.0)
-
- dep: python-matplotlib
- Python based plotting system in a style similar to Matlab
-
- dep: python-numpy
- Numerical Python adds a fast array facility to the Python language
-
- dep: python-scipy
- scientific tools for Python
-
- dep: python-sympy
- Python中的计算机代数系统
-
- dep: python-wxgtk3.0
- Python interface to the wxWidgets Cross-platform C++ GUI toolkit
-
- rec: cain-examples
- examples for cain