软件包:python3-biom-format(2.1.7+dfsg-2)
python3-biom-format 的相关链接
Debian 的资源:
下载源码包 python-biom-format:
- [python-biom-format_2.1.7+dfsg-2.dsc]
- [python-biom-format_2.1.7+dfsg.orig.tar.xz]
- [python-biom-format_2.1.7+dfsg-2.debian.tar.xz]
维护小组:
外部的资源:
- 主页 [biom-format.org]
相似软件包:
Biological Observation Matrix (BIOM) format (Python 3)
The BIOM file format (canonically pronounced biome) is designed to be a general-use format for representing biological sample by observation contingency tables. BIOM is a recognized standard for the Earth Microbiome Project and is a Genomics Standards Consortium candidate project.
The BIOM format is designed for general use in broad areas of comparative -omics. For example, in marker-gene surveys, the primary use of this format is to represent OTU tables: the observations in this case are OTUs and the matrix contains counts corresponding to the number of times each OTU is observed in each sample. With respect to metagenome data, this format would be used to represent metagenome tables: the observations in this case might correspond to SEED subsystems, and the matrix would contain counts corresponding to the number of times each subsystem is observed in each metagenome. Similarly, with respect to genome data, this format may be used to represent a set of genomes: the observations in this case again might correspond to SEED subsystems, and the counts would correspond to the number of times each subsystem is observed in each genome.
This package provides the BIOM format library for the Python 3 interpreter.
其他与 python3-biom-format 有关的软件包
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- dep: libc6 (>= 2.4)
- GNU C 语言运行库:共享库
同时作为一个虚包由这些包填实: libc6-udeb
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- dep: python3
- 交互式高级面向对象语言(默认 python3 版本)
- dep: python3 (<< 3.8)
- dep: python3 (>= 3.7~)
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- dep: python3-future
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- dep: python3-numpy (>= 1:1.16.0~rc1)
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- dep: python3-numpy-abi9
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- dep: python3-pandas
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- dep: python3-scipy
- scientific tools for Python 3
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- dep: python3-six (>= 1.10.0)
- Python 2 and 3 compatibility library (Python 3 interface)
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- sug: python-biom-format-doc
- documentation for BIOM format