[ 源代码： trnascan-se ]
软件包：trnascan-se（2.0.7+ds-1） [non-free]
trnascan-se 的相关链接
Debian 的资源：
下载源码包 trnascan-se：
- [trnascan-se_2.0.7+ds-1.dsc]
- [trnascan-se_2.0.7+ds.orig.tar.gz]
- [trnascan-se_2.0.7+ds-1.debian.tar.xz]
维护小组：
外部的资源：
- 主页 [lowelab.ucsc.edu]
相似软件包：
detection of transfer RNA genes in genomic sequence
tRNAscan-SE identifies 99-100% of transfer RNA genes in DNA sequence while giving less than one false positive per 15 gigabases. Two previously described tRNA detection programs are used as fast, first-pass prefilters to identify candidate tRNAs, which are then analyzed by a highly selective tRNA covariance model. This work represents a practical application of RNA covariance models, which are general, probabilistic secondary structure profiles based on stochastic context-free grammars. tRNAscan-SE searches at ~ 30 000 bp/s. Additional extensions to tRNAscan-SE detect unusual tRNA homologues such as selenocysteine tRNAs, tRNA-derived repetitive elements and tRNA pseudogenes.
其他与 trnascan-se 有关的软件包
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- dep: infernal
- inference of RNA secondary structural alignments
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- dep: libc6 (>= 2.29)
- GNU C 语言运行库：共享库
同时作为一个虚包由这些包填实： libc6-udeb
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- dep: perl
- 拉里 沃尔的实用报表提取语言(Perl)
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- dep: trnascan-se-common (= 2.0.7+ds-1)
- detection of transfer RNA genes in genomic sequence (common files)