软件包：r-cran-spp（1.16.0-2）

[ 源代码： r-cran-spp  ]

GNU R ChIP-seq processing pipeline

R package for anlaysis of ChIP-seq and other functional sequencing data

 * Assess overall DNA-binding signals in the data and select appropriate
   quality of tag alignment.
 * Discard or restrict positions with abnormally high number of tags.
 * Calculate genome-wide profiles of smoothed tag density and save them
   in WIG files for viewing in other browsers.
 * Calculate genome-wide profiles providing conservative statistical
   estimates of fold enrichment ratios along the genome. These can be
   exported for browser viewing, or thresholded to determine regions of
   significant enrichment/depletion.
 * Determine statistically significant point binding positions
 * Assess whether the set of point binding positions detected at a
   current sequencing depth meets saturation criteria, and if does not,
   estimate what sequencing depth would be required to do so.

其他与 r-cran-spp 有关的软件包

• dep: libbz2-1.0

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• dep: libc6 (>= 2.29)

  GNU C 语言运行库：共享库
  同时作为一个虚包由这些包填实： libc6-udeb

• dep: libgcc-s1 (>= 3.0) [除 armel, armhf]

  GCC 支持库

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

• dep: libstdc++6 (>= 5.2)

  GNU 标准 C++ 库，第3版

• dep: r-api-4.0

  本虚包由这些包填实： r-base-core

• dep: r-base-core (>= 4.0.2-1)

  GNU R core of statistical computation and graphics system

• dep: r-bioc-rsamtools

  GNU R binary alignment (BAM), variant call (BCF), or tabix file import

• dep: r-cran-bh (>= 1.66)

  (Virtual) GNU R package to provide BH

• dep: r-cran-catools

  GNU R package providing various utility functions

• dep: r-cran-rcpp

  GNU R package for Seamless R and C++ Integration

• dep: zlib1g (>= 1:1.1.4)

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下载 r-cran-spp

下载可用于所有硬件架构的

硬件架构	软件包大小	安装后大小	文件
amd64	315.3 kB	453.0 kB	[文件列表]
arm64	309.7 kB	425.0 kB	[文件列表]
armel	309.8 kB	424.0 kB	[文件列表]
armhf	309.5 kB	391.0 kB	[文件列表]
i386	320.8 kB	459.0 kB	[文件列表]
mips64el	308.7 kB	452.0 kB	[文件列表]
mipsel	308.6 kB	454.0 kB	[文件列表]
ppc64el	317.2 kB	497.0 kB	[文件列表]
s390x	311.0 kB	444.0 kB	[文件列表]