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[ 源代码： clustalx  ]

软件包：clustalx（2.1+lgpl-9）

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Multiple alignment of nucleic acid and protein sequences (graphical interface)

This package offers a GUI interface for the Clustal multiple sequence alignment program. It provides an integrated environment for performing multiple sequence- and profile-alignments to analyse the results. The sequence alignment is displayed in a window on the screen. A versatile coloring scheme has been incorporated to highlight conserved features in the alignment. For professional presentations, one should use the texshade LaTeX package or boxshade.

The pull-down menus at the top of the window allow you to select all the options required for traditional multiple sequence and profile alignment. You can cut-and-paste sequences to change the order of the alignment; you can select a subset of sequences to be aligned; you can select a sub-range of the alignment to be realigned and inserted back into the original alignment.

An alignment quality analysis can be performed and low-scoring segments or exceptional residues can be highlighted.

标签: 生物学: Clustal/ALN, 蛋白质, 领域: field::biology, field::biology:bioinformatics, 实做语言: implemented-in::c, interface::commandline, 用户接口: Graphical User Interface, interface::x11, role::program, 范围: 实用程序, 界面工具箱: Lesstif/Motif, uitoolkit::qt, use::analysing, Purpose: 比较, use::viewing, works-with-format::plaintext, 处理: 需要一个额外的标签, X 窗口系统: 应用程序

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