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[ 源代码: libsmithwaterman  ]

软件包:smithwaterman(0.0+git20160702.2610e25-11)

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determine similar regions between two strings or genomic sequences

The Smith–Waterman algorithm performs local sequence alignment; that is, for determining similar regions between two strings or nucleotide or protein sequences. Instead of looking at the total sequence, the Smith–Waterman algorithm compares segments of all possible lengths and optimizes the similarity measure.

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