软件包：trnascan-se-common（2.0.10+ds-1） [non-free]
trnascan-se-common 的相关链接
Debian 的资源：
下载源码包 trnascan-se：
- [trnascan-se_2.0.10+ds-1.dsc]
- [trnascan-se_2.0.10+ds.orig.tar.gz]
- [trnascan-se_2.0.10+ds-1.debian.tar.xz]
维护小组：
外部的资源：
- 主页 [lowelab.ucsc.edu]
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detection of transfer RNA genes in genomic sequence (common files)
tRNAscan-SE identifies 99-100% of transfer RNA genes in DNA sequence while giving less than one false positive per 15 gigabases. Two previously described tRNA detection programs are used as fast, first-pass prefilters to identify candidate tRNAs, which are then analyzed by a highly selective tRNA covariance model. This work represents a practical application of RNA covariance models, which are general, probabilistic secondary structure profiles based on stochastic context-free grammars. tRNAscan-SE searches at ~ 30 000 bp/s. Additional extensions to tRNAscan-SE detect unusual tRNA homologues such as selenocysteine tRNAs, tRNA-derived repetitive elements and tRNA pseudogenes.
This package contains the architecture-independent common files.