软件包：python3-biom-format（2.1.12-3 以及其他的）

[ 源代码： python-biom-format  ]

Biological Observation Matrix (BIOM) format (Python 3)

The BIOM file format (canonically pronounced biome) is designed to be a general-use format for representing biological sample by observation contingency tables. BIOM is a recognized standard for the Earth Microbiome Project and is a Genomics Standards Consortium candidate project.

The BIOM format is designed for general use in broad areas of comparative -omics. For example, in marker-gene surveys, the primary use of this format is to represent OTU tables: the observations in this case are OTUs and the matrix contains counts corresponding to the number of times each OTU is observed in each sample. With respect to metagenome data, this format would be used to represent metagenome tables: the observations in this case might correspond to SEED subsystems, and the matrix would contain counts corresponding to the number of times each subsystem is observed in each metagenome. Similarly, with respect to genome data, this format may be used to represent a set of genomes: the observations in this case again might correspond to SEED subsystems, and the counts would correspond to the number of times each subsystem is observed in each genome.

This package provides the BIOM format library for the Python 3 interpreter.

其他与 python3-biom-format 有关的软件包

• dep: cython3

  C-Extensions for Python 3

• dep: libc6 (>= 2.17) [arm64, ppc64el]

  GNU C 语言运行库：共享库
  同时作为一个虚包由这些包填实： libc6-udeb

  dep: libc6 (>= 2.4) [除 arm64, ppc64el]

• dep: python3

  interactive high-level object-oriented language (default python3 version)

  dep: python3 (<< 3.12)

  dep: python3 (>= 3.11~)

• dep: python3-click

  Wrapper around optparse for command line utilities - Python 3.x

• dep: python3-h5py

  general-purpose Python interface to hdf5

• dep: python3-numpy (>= 1:1.22.0)

  Fast array facility to the Python 3 language

• dep: python3-numpy-abi9

  本虚包由这些包填实： python3-numpy

• dep: python3-pandas

  data structures for "relational" or "labeled" data

• dep: python3-scipy

  scientific tools for Python 3

• sug: python-biom-format-doc

  documentation for BIOM format

下载 python3-biom-format

下载可用于所有硬件架构的

硬件架构	版本	软件包大小	安装后大小	文件
amd64	2.1.12-3+b1	125.4 kB	738.0 kB	[文件列表]
arm64	2.1.12-3+b1	119.7 kB	818.0 kB	[文件列表]
armel	2.1.12-3+b1	118.6 kB	700.0 kB	[文件列表]
armhf	2.1.12-3+b1	118.6 kB	664.0 kB	[文件列表]
i386	2.1.12-3+b1	125.2 kB	737.0 kB	[文件列表]
mips64el	2.1.12-3+b1	119.0 kB	823.0 kB	[文件列表]
mipsel	2.1.12-3+b1	118.9 kB	817.0 kB	[文件列表]
ppc64el	2.1.12-3+b1	124.6 kB	818.0 kB	[文件列表]
s390x	2.1.12-3+b1	118.9 kB	730.0 kB	[文件列表]