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Пакунок: tree-puzzle (5.3~rc16+dfsg-11) [debports]

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Reconstruction of phylogenetic trees by maximum likelihood

TREE-PUZZLE (the new name for PUZZLE) is an interactive console program that implements a fast tree search algorithm, quartet puzzling, that allows analysis of large data sets and automatically assigns estimations of support to each internal branch. TREE-PUZZLE also computes pairwise maximum likelihood distances as well as branch lengths for user specified trees. Branch lengths can also be calculated under the clock-assumption. In addition, TREE-PUZZLE offers a novel method, likelihood mapping, to investigate the support of a hypothesized internal branch without computing an overall tree and to visualize the phylogenetic content of a sequence alignment.

Інші пакунки пов'язані з tree-puzzle

  • depends
  • recommends
  • suggests
  • enhances

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sh4 (unofficial port) 178.3 kB364.0 kB [список файлів]