Пакунок: r-bioc-metagenomeseq (1.46.0-1)

[ Source: r-bioc-metagenomeseq  ]

GNU R statistical analysis for sparse high-throughput sequencing

MetagenomeSeq is designed to determine features (be it Operational Taxanomic Unit (OTU), species, etc.) that are differentially abundant between two or more groups of multiple samples. metagenomeSeq is designed to address the effects of both normalization and under-sampling of microbial communities on disease association detection and the testing of feature correlations.

Інші пакунки пов'язані з r-bioc-metagenomeseq

• dep: r-api-4.0

  virtual package provided by r-base-core

• dep: r-api-bioc-3.19

  virtual package provided by r-bioc-biocgenerics

• dep: r-bioc-biobase (>= 2.64.0)

  base functions for Bioconductor

• dep: r-bioc-limma (>= 3.60.4)

  linear models for microarray data

• dep: r-bioc-wrench (>= 1.22.0)

  GNU R wrench normalization for sparse count data

• dep: r-cran-foreach

  GNU R foreach looping support

• dep: r-cran-glmnet

  Lasso and Elastic-Net Regularized Generalized Linear Models

• dep: r-cran-gplots

  GNU R package with tools for plotting data by Greg Warnes et al

• dep: r-cran-matrix

  GNU R package of classes for dense and sparse matrices

• dep: r-cran-matrixstats

  GNU R methods that apply to rows and columns of a matrix

• dep: r-cran-rcolorbrewer

  GNU R package providing suitable color palettes

• sug: r-bioc-annotate (>= 1.82.0)

  BioConductor annotation for microarrays

• sug: r-bioc-biocgenerics (>= 0.50.0)

  generic functions for Bioconductor

• sug: r-bioc-biomformat (>= 1.32.0)

  GNU R interface package for the BIOM file format

• sug: r-bioc-ihw (>= 1.32.0)

  GNU R independent hypothesis weighting

• sug: r-cran-gss

  GNU R package for multivariate estimation using smoothing splines

• sug: r-cran-knitr

  GNU R package for dynamic report generation using Literate Programming

• sug: r-cran-testthat (>= 0.8)

  GNU R testsuite

• sug: r-cran-vegan

  Community Ecology Package for R

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