Пакунок: r-bioc-multiassayexperiment (1.30.3+dfsg-2)

[ Source: r-bioc-multiassayexperiment  ]

Software for integrating multi-omics experiments in BioConductor

MultiAssayExperiment harmonizes data management of multiple assays performed on an overlapping set of specimens. It provides a familiar Bioconductor user experience by extending concepts from SummarizedExperiment, supporting an open-ended mix of standard data classes for individual assays, and allowing subsetting by genomic ranges or rownames.

Інші пакунки пов'язані з r-bioc-multiassayexperiment

• dep: r-api-4.0

  virtual package provided by r-base-core

• dep: r-api-bioc-3.19

  virtual package provided by r-bioc-biocgenerics

• dep: r-bioc-biobase (>= 2.64.0)

  base functions for Bioconductor

• dep: r-bioc-biocbaseutils (>= 1.6.0)

  General utility functions for developing Bioconductor packages

• dep: r-bioc-biocgenerics (>= 0.50.0)

  generic functions for Bioconductor

• dep: r-bioc-delayedarray (>= 0.30.1)

  BioConductor delayed operations on array-like objects

• dep: r-bioc-genomicranges (>= 1.56.1)

  BioConductor representation and manipulation of genomic intervals

• dep: r-bioc-iranges (>= 2.38.1)

  GNU R low-level containers for storing sets of integer ranges

• dep: r-bioc-s4vectors (>= 0.42.1)

  BioConductor S4 implementation of vectors and lists

• dep: r-bioc-summarizedexperiment (>= 1.34.0)

  BioConductor assay container

• dep: r-cran-tidyr

  GNU R package to easily tidy data

• sug: r-bioc-biocstyle (>= 2.32.1)

  standard styles for vignettes and other Bioconductor documents

• sug: r-bioc-hdf5array (>= 1.32.0)

  HDF5 backend for DelayedArray objects

• sug: r-cran-knitr

  GNU R package for dynamic report generation using Literate Programming

• sug: r-cran-r.rsp

  Dynamic Generation of Scientific Reports

• sug: r-cran-reshape2

  Flexibly reshape data: a reboot of the reshape package

• sug: r-cran-rmarkdown

  convert R markdown documents into a variety of formats

• sug: r-cran-survival

  GNU R package for survival analysis

• sug: r-cran-survminer

  GNU R drawing survival curves using 'ggplot2'

• sug: r-cran-testthat

  GNU R testsuite

• sug: r-cran-upsetr

  GNU R visualization of intersecting sets

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