Пакунок: r-bioc-organismdbi (1.48.0+dfsg-1)

[ Source: r-bioc-organismdbi  ]

Експериментальний пакунок

Warning: This package is from the experimental distribution. That means it is likely unstable or buggy, and it may even cause data loss. Please be sure to consult the changelog and other possible documentation before using it.

smooth interfacing of different database packages

The package enables a simple unified interface to several annotation packages each of which has its own schema by taking advantage of the fact that each of these packages implements a select methods.

Інші пакунки пов'язані з r-bioc-organismdbi

• dep: r-api-4.0

  Пакунок недоступний

• dep: r-api-bioc-3.20

  virtual package provided by r-bioc-biocgenerics

• dep: r-bioc-annotationdbi (>= 1.33.15)

  GNU R Annotation Database Interface for BioConductor

• dep: r-bioc-biobase

  base functions for Bioconductor

• dep: r-bioc-biocgenerics (>= 0.15.10)

  generic functions for Bioconductor

• dep: r-bioc-genomicfeatures (>= 1.39.4)

  GNU R tools for making and manipulating transcript centric annotations

• dep: r-bioc-genomicranges (>= 1.31.13)

  BioConductor representation and manipulation of genomic intervals

• dep: r-bioc-graph

  handle graph data structures for BioConductor

• dep: r-bioc-iranges

  GNU R low-level containers for storing sets of integer ranges

• dep: r-bioc-rbgl

  R interface to the graph algorithms contained in the BOOST library

• dep: r-bioc-s4vectors

  BioConductor S4 implementation of vectors and lists

• dep: r-bioc-txdbmaker

  Tools for making TxDb objects from genomic annotations

• dep: r-cran-biocmanager

  access the Bioconductor project package repository

• dep: r-cran-dbi

  GNU R package providing a generic database interface

• sug: r-bioc-annotationhub

  GNU R client to access AnnotationHub resources

• sug: r-bioc-biocstyle

  standard styles for vignettes and other Bioconductor documents

• sug: r-bioc-biomart

  GNU R Interface to BioMart databases (Ensembl, COSMIC, Wormbase and Gramene)

• sug: r-bioc-rtracklayer

  GNU R interface to genome browsers and their annotation tracks

• sug: r-cran-knitr

  GNU R package for dynamic report generation using Literate Programming

• sug: r-cran-rmariadb

  Database Interface and 'MariaDB' Driver

• sug: r-cran-runit

  GNU R package providing unit testing framework

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