Пакунок: r-bioc-summarizedexperiment (1.36.0+dfsg-1)

[ Source: r-bioc-summarizedexperiment  ]

Експериментальний пакунок

Warning: This package is from the experimental distribution. That means it is likely unstable or buggy, and it may even cause data loss. Please be sure to consult the changelog and other possible documentation before using it.

BioConductor assay container

The SummarizedExperiment container contains one or more assays, each represented by a matrix-like object of numeric or other mode. The rows typically represent genomic ranges of interest and the columns represent samples.

Інші пакунки пов'язані з r-bioc-summarizedexperiment

• dep: r-api-4.0

  Пакунок недоступний

• dep: r-api-bioc-3.20

  virtual package provided by r-bioc-biocgenerics

• dep: r-bioc-biobase

  base functions for Bioconductor

• dep: r-bioc-biocgenerics (>= 0.51.3)

  generic functions for Bioconductor

• dep: r-bioc-delayedarray (>= 0.31.12)

  BioConductor delayed operations on array-like objects

• dep: r-bioc-genomeinfodb (>= 1.13.1)

  BioConductor utilities for manipulating chromosome identifiers

• dep: r-bioc-genomicranges (>= 1.55.2)

  BioConductor representation and manipulation of genomic intervals

• dep: r-bioc-iranges (>= 2.23.9)

  GNU R low-level containers for storing sets of integer ranges

• dep: r-bioc-matrixgenerics (>= 1.1.3)

  S4 Generic Summary Statistic Functions that Operate on Matrix-Like Objects

• dep: r-bioc-s4arrays (>= 1.1.1)

  foundation of array-like containers in Bioconductor

• dep: r-bioc-s4vectors (>= 0.33.7)

  BioConductor S4 implementation of vectors and lists

• dep: r-cran-matrix

  GNU R package of classes for dense and sparse matrices

• sug: r-bioc-annotate

  BioConductor annotation for microarrays

• sug: r-bioc-annotationdbi

  GNU R Annotation Database Interface for BioConductor

• sug: r-bioc-biocstyle

  standard styles for vignettes and other Bioconductor documents

• sug: r-bioc-genomicfeatures

  GNU R tools for making and manipulating transcript centric annotations

• sug: r-bioc-hdf5array (>= 1.7.5)

  HDF5 backend for DelayedArray objects

• sug: r-bioc-rhdf5

  BioConductor HDF5 interface to R

• sug: r-bioc-singlecellexperiment

  S4 Classes for Single Cell Data

• sug: r-bioc-sparsearray

  efficient in-memory representation of multidimensional sparse arrays

• sug: r-cran-digest

  GNU R package for 'hash digest' of R data structures

• sug: r-cran-jsonlite

  Robust, High Performance JSON Parser and Generator for R

• sug: r-cran-knitr

  GNU R package for dynamic report generation using Literate Programming

• sug: r-cran-rmarkdown

  convert R markdown documents into a variety of formats

• sug: r-cran-runit

  GNU R package providing unit testing framework

• sug: r-cran-testthat

  GNU R testsuite

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