Пакунок: tree-puzzle (5.2-11)

[ Source: tree-puzzle  ]

Reconstruction of phylogenetic trees by maximum likelihood

TREE-PUZZLE (the new name for PUZZLE) is an interactive console program that implements a fast tree search algorithm, quartet puzzling, that allows analysis of large data sets and automatically assigns estimations of support to each internal branch. TREE-PUZZLE also computes pairwise maximum likelihood distances as well as branch lengths for user specified trees. Branch lengths can also be calculated under the clock-assumption. In addition, TREE-PUZZLE offers a novel method, likelihood mapping, to investigate the support of a hypothesized internal branch without computing an overall tree and to visualize the phylogenetic content of a sequence alignment.

Tags: Field: Biology, Bioinformatics, Implemented in: implemented-in::c, interface::commandline, Role: Program, Scope: Utility, Purpose: use::analysing, use::comparing, Supports Format: Plain Text, Works with: Need an extra tag

Інші пакунки пов'язані з tree-puzzle

• dep: libc6 (>= 2.17) [arm64]

  Бібліотека GNU C: спільні бібліотеки
  also a virtual package provided by libc6-udeb

  dep: libc6 (>= 2.7) [not arm64]

• dep: libsprng2

  SPRNG Scalable Parallel RNG library -- library package

• rec: tree-puzzle-doc

  Reconstruction of phylogenetic trees by maximum likelihood (doc)

• sug: phylip

  package of programs for inferring phylogenies

• sug: treetool

  Пакунок недоступний

Завантажити tree-puzzle

Завантаження для всіх доступних архітектур

Архітектура	Розмір пакунка	Розмір після встановлення	Файли
amd64	132.9 kB	313.0 kB	[список файлів]
arm64	127.1 kB	317.0 kB	[список файлів]
armhf	121.2 kB	241.0 kB	[список файлів]
i386	134.3 kB	333.0 kB	[список файлів]