Пакунок: bbmap (38.90+dfsg-1)
Links for bbmap
Debian Resources:
Download Source Package bbmap:
Maintainers:
External Resources:
- Homepage [sourceforge.net]
Similar packages:
short read aligner and other bioinformatic tools
BBMap: Short read aligner for DNA and RNA-seq data. Capable of handling arbitrarily large genomes with millions of scaffolds. Handles Illumina, PacBio, 454, and other reads; very high sensitivity and tolerant of errors and numerous large indels.
BBMap is multithreaded as well as the other tools bundled into this package for instance:
BBNorm: Kmer-based error-correction and normalization tool.
Dedupe: Simplifies assemblies by removing duplicate or contained subsequences that share a target percent identity.
Reformat: Reformats reads between fasta/fastq/scarf/fasta+qual/sam, interleaved/paired, and ASCII-33/64, at over 500 MB/s.
BBDuk: Filters, trims, or masks reads with kmer matches to an artifact/contaminant file.
Інші пакунки пов'язані з bbmap
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- dep: libmpj-java
- Java library for parallel applications for multicore processors and clusters
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- rec: pigz
- Реалізація паралельного GZip
Завантажити bbmap
Архітектура | Розмір пакунка | Розмір після встановлення | Файли |
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all | 5,394.0 kB | 6,138.0 kB | [список файлів] |