Пакунок: r-cran-adegenet (2.1.3-1)

[ Source: r-cran-adegenet  ]

GNU R exploratory analysis of genetic and genomic data

Toolset for the exploration of genetic and genomic data. Adegenet provides formal (S4) classes for storing and handling various genetic data, including genetic markers with varying ploidy and hierarchical population structure ('genind' class), alleles counts by populations ('genpop'), and genome-wide SNP data ('genlight'). It also implements original multivariate methods (DAPC, sPCA), graphics, statistical tests, simulation tools, distance and similarity measures, and several spatial methods. A range of both empirical and simulated datasets is also provided to illustrate various methods.

Інші пакунки пов'язані з r-cran-adegenet

• dep: libc6 (>= 2.4)

  Бібліотека GNU C: спільні бібліотеки
  also a virtual package provided by libc6-udeb

• dep: r-api-4.0

  virtual package provided by r-base-core

• dep: r-base-core (>= 4.0.0-3)

  GNU R core of statistical computation and graphics system

• dep: r-cran-ade4

  GNU R analysis of ecological data

• dep: r-cran-ape

  GNU R package for Analyses of Phylogenetics and Evolution

• dep: r-cran-boot

  GNU R package for bootstrapping functions from Davison and Hinkley

• dep: r-cran-dplyr (>= 0.4.1)

  GNU R grammar of data manipulation

• dep: r-cran-ggplot2

  implementation of the Grammar of Graphics

• dep: r-cran-igraph

  GNU R network analysis and visualization

• dep: r-cran-mass

  GNU R package of Venables and Ripley's MASS

• dep: r-cran-reshape2

  Flexibly reshape data: a reboot of the reshape package

• dep: r-cran-seqinr

  GNU R biological sequences retrieval and analysis

• dep: r-cran-shiny

  GNU R web application framework

• dep: r-cran-spdep

  GNU R spatial dependence: weighting schemes, statistics and models

• dep: r-cran-vegan

  Community Ecology Package for R

• rec: r-cran-testthat

  GNU R testsuite

• sug: r-cran-maps

  GNU R support for producing geographic maps

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