Paket: hmmer (3.4+dfsg-2 och andra)

[ Källkod: hmmer  ]

profile hidden Markov models for protein sequence analysis

HMMER is an implementation of profile hidden Markov model methods for sensitive searches of biological sequence databases using multiple sequence alignments as queries.

Given a multiple sequence alignment as input, HMMER builds a statistical model called a "hidden Markov model" which can then be used as a query into a sequence database to find (and/or align) additional homologues of the sequence family.

Märken: Biologi: Clustal/ALN, Proteiner, Field: field::biology, field::biology:bioinformatics, Implemented in: implemented-in::c, interface::commandline, Role: Program, Scope: Utility, Purpose: use::searching, works-with-format::plaintext, Works with: Databases

Andra paket besläktade med hmmer

• dep: libc6 (>= 2.34)

  GNU C-bibliotek: Delade bibliotek
  också ett virtuellt paket som tillhandahålls av libc6-udeb

• dep: libdivsufsort3 (>= 2.0.1)

  fast suffix array construction

• sug: hmmer-doc (>= 3.4+dfsg-2)

  profile hidden Markov models for protein sequence analysis (docs)

Hämta hmmer

Hämtningar för alla tillgängliga arkitekturer

Arkitektur	Version	Paketstorlek	Installerad storlek	Filer
amd64	3.4+dfsg-2	1.037,5 kbyte	6.466,0 kbyte	[filförteckning]
arm64	3.4+dfsg-2+b1	954,2 kbyte	7.122,0 kbyte	[filförteckning]
i386	3.4+dfsg-2	1.068,1 kbyte	6.187,0 kbyte	[filförteckning]