Paket: r-bioc-singler (2.4.1+ds-1)

[ Källkod: r-bioc-singler  ]

BioConductor reference-based single-cell RNA-Seq annotation

Performs unbiased cell type recognition from single-cell RNA sequencing data, by leveraging reference transcriptomic datasets of pure cell types to infer the cell of origin of each single cell independently.

Andra paket besläktade med r-bioc-singler

• dep: libc6 (>= 2.32)

  GNU C-bibliotek: Delade bibliotek
  också ett virtuellt paket som tillhandahålls av libc6-udeb

• dep: libgcc-s1 (>= 3.0) [ej armel, armhf, i386]

  GCC stödbibliotek

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

  dep: libgcc-s1 (>= 4.2) [i386]

• dep: libstdc++6 (>= 13.1)

  GNU standardbibliotek v3 för C++

• dep: r-api-4.0

  virtuellt paket som tillhandahålls av r-base-core

• dep: r-api-bioc-3.18

  virtuellt paket som tillhandahålls av r-bioc-biocgenerics

• dep: r-bioc-beachmat

  I/O for several formats storing matrix data

• dep: r-bioc-biocneighbors

  Nearest Neighbor Detection for Bioconductor Packages

• dep: r-bioc-biocparallel

  BioConductor facilities for parallel evaluation

• dep: r-bioc-biocsingular

  Singular Value Decomposition for Bioconductor Packages

• dep: r-bioc-delayedarray

  BioConductor delayed operations on array-like objects

• dep: r-bioc-delayedmatrixstats

  Functions on Rows and Columns of 'DelayedMatrix' Objects

• dep: r-bioc-s4vectors

  BioConductor S4 implementation of vectors and lists

• dep: r-bioc-summarizedexperiment

  BioConductor assay container

• dep: r-cran-matrix

  GNU R package of classes for dense and sparse matrices

• dep: r-cran-rcpp

  GNU R package for Seamless R and C++ Integration

• sug: r-bioc-biocgenerics

  generic functions for Bioconductor

• sug: r-bioc-biocstyle

  standard styles for vignettes and other Bioconductor documents

• sug: r-bioc-scater

  Single-Cell Analysis Toolkit for Gene Expression Data in R

• sug: r-bioc-scran

  BioConductor methods for single-cell RNA-Seq data analysis

• sug: r-bioc-scrnaseq

  Collection of Public Single-Cell RNA-Seq Datasets

• sug: r-bioc-scuttle

  BioConductor single-cell RNA-Seq analysis utilities

• sug: r-bioc-singlecellexperiment

  S4 Classes for Single Cell Data

• sug: r-cran-ggplot2

  implementation of the Grammar of Graphics

• sug: r-cran-gridextra

  GNU R package with extensions for the grid package

• sug: r-cran-knitr

  GNU R package for dynamic report generation using Literate Programming

• sug: r-cran-pheatmap

  GNU R package to create pretty heatmaps

• sug: r-cran-rmarkdown

  convert R markdown documents into a variety of formats

• sug: r-cran-testthat

  GNU R testsuite

• sug: r-cran-viridis

  GNU R package for color maps from matplotlib

Hämta r-bioc-singler

Hämtningar för alla tillgängliga arkitekturer

Arkitektur	Paketstorlek	Installerad storlek	Filer
amd64	326,9 kbyte	795,0 kbyte	[filförteckning]
arm64	311,7 kbyte	771,0 kbyte	[filförteckning]
armel	309,2 kbyte	742,0 kbyte	[filförteckning]
armhf	309,4 kbyte	654,0 kbyte	[filförteckning]
i386	334,9 kbyte	801,0 kbyte	[filförteckning]
mips64el	310,4 kbyte	861,0 kbyte	[filförteckning]
ppc64el	331,7 kbyte	899,0 kbyte	[filförteckning]
s390x	333,9 kbyte	843,0 kbyte	[filförteckning]