Paket: r-bioc-scran (1.32.0+dfsg-1)

[ Källkod: r-bioc-scran  ]

BioConductor methods for single-cell RNA-Seq data analysis

Implements functions for low-level analyses of single-cell RNA-seq data. Methods are provided for normalization of cell-specific biases, assignment of cell cycle phase, detection of highly variable and significantly correlated genes, identification of marker genes, and other common tasks in routine single-cell analysis workflows.

Andra paket besläktade med r-bioc-scran

• dep: libc6 (>= 2.29)

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  också ett virtuellt paket som tillhandahålls av libc6-udeb

• dep: libgcc-s1 (>= 3.0)

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• dep: liblapack3

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  eller liblapack.so.3

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• dep: libstdc++6 (>= 14)

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• dep: r-api-4.0

  virtuellt paket som tillhandahålls av r-base-core

• dep: r-api-bioc-3.19

  virtuellt paket som tillhandahålls av r-bioc-biocgenerics

• dep: r-bioc-beachmat (>= 2.20.0)

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• dep: r-bioc-biocgenerics (>= 0.50.0)

  generic functions for Bioconductor

• dep: r-bioc-biocparallel (>= 1.38.0)

  BioConductor facilities for parallel evaluation

• dep: r-bioc-biocsingular (>= 1.20.0)

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• dep: r-bioc-bluster (>= 1.14.0)

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• dep: r-bioc-delayedarray (>= 0.30.1)

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• dep: r-bioc-delayedmatrixstats (>= 1.26.0)

  Functions on Rows and Columns of 'DelayedMatrix' Objects

• dep: r-bioc-edger (>= 4.2.0)

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• dep: r-bioc-limma (>= 3.60.3)

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• dep: r-bioc-metapod (>= 1.12.0)

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• dep: r-bioc-s4vectors (>= 0.42.1)

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• dep: r-bioc-scuttle (>= 1.14.0)

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• dep: r-bioc-singlecellexperiment (>= 1.26.0)

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• dep: r-bioc-summarizedexperiment (>= 1.34.0)

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• dep: r-cran-bh

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• dep: r-cran-dqrng

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• dep: r-cran-igraph

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• dep: r-cran-matrix

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• dep: r-cran-rcpp

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• dep: r-cran-statmod

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• sug: r-bioc-biocstyle

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• sug: r-bioc-deseq2

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• sug: r-bioc-hdf5array

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• sug: r-bioc-residualmatrix

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• sug: r-bioc-scaledmatrix

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• sug: r-bioc-scater

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• sug: r-bioc-scrnaseq

  Paketet inte tillgängligt

• sug: r-cran-dynamictreecut

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• sug: r-cran-knitr

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• sug: r-cran-pheatmap

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• sug: r-cran-rmarkdown

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• sug: r-cran-testthat

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Arkitektur	Paketstorlek	Installerad storlek	Filer
arm64	976,7 kbyte	1.429,0 kbyte	[filförteckning]