Paket: ltrsift (1.0.2-10)

[ Källkod: ltrsift  ]

postprocessing and classification of LTR retrotransposons

LTRsift is a graphical desktop tool for semi-automatic postprocessing of de novo predicted LTR retrotransposon annotations, such as the ones generated by LTRharvest and LTRdigest. Its user-friendly interface displays LTR retrotransposon candidates, their putative families and their internal structure in a hierarchical fashion, allowing the user to "sift" through the sometimes large results of de novo prediction software. It also offers customizable filtering and classification functionality.

Märken: Field: Biologi, Bioinformatics, Implemented in: implemented-in::c, interface::commandline, User Interface: Graphical User Interface, interface::x11, role::program, Scope: Utility, Interface Toolkit: GTK, Purpose: use::analysing, use::browsing, Comparing, Data Organisation, use::viewing, x11::application

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• dep: libcairo2 (>= 1.2.4)

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• dep: libglib2.0-0t64 (>= 2.75.3)

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• dep: libgtk2.0-0t64 (>= 2.18.0)

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• dep: libpango-1.0-0 (>= 1.14.0)

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• rec: last-align

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• rec: ncbi-blast+

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Hämtningar för alla tillgängliga arkitekturer

Arkitektur	Paketstorlek	Installerad storlek	Filer
amd64	96,6 kbyte	364,0 kbyte	[filförteckning]