Paket: resfinder-example (4.4.2-1)

[ Källkod: resfinder  ]

identify acquired antimicrobial resistance genes (example data)

ResFinder identifies acquired antimicrobial resistance genes in total or partial sequenced isolates of bacteria.

ResFinder that uses BLAST for identification of acquired antimicrobial resistance genes in whole-genome data. As input, the method can use both pre-assembled, complete or partial genomes, and short sequence reads from four different sequencing platforms. The method was evaluated on 1862 GenBank files containing 1411 different resistance genes, as well as on 23 de-novo-sequenced isolates.

This package contains example data to test resfinder.

Andra paket besläktade med resfinder-example

• rec: resfinder

  identify acquired antimicrobial resistance genes

Hämta resfinder-example

Hämtningar för alla tillgängliga arkitekturer

Arkitektur	Paketstorlek	Installerad storlek	Filer
all	561,3 kbyte	858,0 kbyte	[filförteckning]