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Källkodspaket: r-bioc-variantannotation (1.36.0-1)

Länkar för r-bioc-variantannotation

Debianresurser:

Ansvariga:

Externa resurser:

Hemsida [bioconductor.org]

Följande binärpaket byggs från detta källkodspaket:

r-bioc-variantannotation: BioConductor annotation of genetic variants

Andra paket besläktade med r-bioc-variantannotation

bygg-beroende

arkitekturoberoende bygg-beroende

adep: debhelper-compat (= 13)

Paketet inte tillgängligt
adep: dh-r

Debian helper tools for packaging R libraries
adep: r-base-dev

GNU R installation of auxiliary GNU R packages
adep: r-bioc-biocgenerics (>= 0.15.3)

generic functions for Bioconductor
adep: r-bioc-matrixgenerics

S4 Generic Summary Statistic Functions that Operate on Matrix-Like Objects
adep: r-bioc-genomeinfodb (>= 1.15.2)

BioConductor utilities for manipulating chromosome identifiers
adep: r-bioc-genomicranges (>= 1.41.5)

BioConductor representation and manipulation of genomic intervals
adep: r-bioc-summarizedexperiment (>= 1.19.5)

BioConductor assay container
adep: r-bioc-rsamtools (>= 1.99.0)

GNU R binary alignment (BAM), variant call (BCF), or tabix file import
adep: r-cran-dbi

GNU R package providing a generic database interface
adep: r-bioc-zlibbioc

(Virtual) zlibbioc Bioconductor package
adep: r-bioc-biobase

base functions for Bioconductor
adep: r-bioc-s4vectors (>= 0.27.12)

BioConductor S4 implementation of vectors and lists
adep: r-bioc-iranges (>= 2.23.9)

GNU R low-level containers for storing sets of integer ranges
adep: r-bioc-xvector (>= 0.29.2)

BioConductor representation and manpulation of external sequences
adep: r-bioc-biostrings (>= 2.57.2)

GNU R string objects representing biological sequences
adep: r-bioc-annotationdbi (>= 1.27.9)

GNU R Annotation Database Interface for BioConductor
adep: r-bioc-rtracklayer (>= 1.39.7)

GNU R interface to genome browsers and their annotation tracks
adep: r-bioc-bsgenome (>= 1.47.3)

BioConductor infrastructure for Biostrings-based genome data packages
adep: r-bioc-genomicfeatures (>= 1.31.3)

GNU R tools for making and manipulating transcript centric annotations
adep: r-bioc-rhtslib

HTSlib high-throughput sequencing library as GNU R package
adep: libcurl4-openssl-dev

development files and documentation for libcurl (OpenSSL flavour)

eller libcurl4-dev

virtuellt paket som tillhandahålls av libcurl4-gnutls-dev, libcurl4-nss-dev, libcurl4-openssl-dev

Download r-bioc-variantannotation

Fil	Storlek (i kbyte)	MD5-kontrollsumma
r-bioc-variantannotation_1.36.0-1.dsc	2,7 kbyte	7e1e844ff667bc844d5453988b272847
r-bioc-variantannotation_1.36.0.orig.tar.gz	1.687,4 kbyte	812e968772fa54c7cf2763a06032ee8e
r-bioc-variantannotation_1.36.0-1.debian.tar.xz	7,9 kbyte	4f83a5f1e878af21f2ffaa27997757e8

Debians paketkällkodsarkiv- (VCS: Git): https://salsa.debian.org/r-pkg-team/r-bioc-variantannotation.git
Debians paketkällkodsarkiv (blädderbart): https://salsa.debian.org/r-pkg-team/r-bioc-variantannotation