Paket: abyss (2.3.10-1 och andra) [debports]

[ Källkod:  ]

de novo, parallel, sequence assembler for short reads

ABySS is a de novo, parallel, sequence assembler that is designed for short reads. It may be used to assemble genome or transcriptome sequence data. Parallelization is achieved using MPI, OpenMP and pthread.

Andra paket besläktade med abyss

• dep: bsdextrautils

  extra utilities from 4.4BSD-Lite

• dep: libc6 (>= 2.38)

  GNU C-bibliotek: Delade bibliotek
  också ett virtuellt paket som tillhandahålls av libc6-udeb

• dep: libgcc-s1 (>= 3.4.4)

  GCC stödbibliotek

• dep: libgomp1 (>= 4.9)

  GCC OpenMP (GOMP) support library

• dep: libopenmpi40 (>= 5.0.6)

  high performance message passing library -- shared library

• dep: libsqlite3-0 (>= 3.5.9)

  SQLite 3 shared library

• dep: libstdc++6 (>= 14)

  GNU standardbibliotek v3 för C++

• dep: make

  utility for directing compilation

• dep: openmpi-bin

  high performance message passing library -- binaries

• dep: openmpi-common

  high performance message passing library -- common files

• dep: perl

  Larry Wall's Practical Extraction and Report Language

Hämta abyss

Hämtningar för alla tillgängliga arkitekturer

Arkitektur	Version	Paketstorlek	Installerad storlek	Filer
ppc64 (inofficiell anpassning)	2.3.10-1+b1	3.152,9 kbyte	13.053,0 kbyte	[filförteckning]