[ Källkod: qcat ]
Paket: qcat (1.1.0-6)
Länkar för qcat
Debianresurser:
Hämta källkodspaketet qcat:
Ansvariga:
Externa resurser:
- Hemsida [github.com]
Liknande paket:
demultiplexing Oxford Nanopore reads from FASTQ files
Qcat is a command-line tool for demultiplexing Oxford Nanopore reads from FASTQ files. It accepts basecalled FASTQ files and splits the reads into separate FASTQ files based on their barcode. Qcat makes the demultiplexing algorithms used in albacore/guppy and EPI2ME available to be used locally with FASTQ files. Currently qcat implements the EPI2ME algorithm.
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- dep: python3
- interactive high-level object-oriented language (default python3 version)
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- dep: python3-biopython
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- dep: python3-parasail
- Python3 bindings for the parasail C library
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- dep: python3-six
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- dep: python3-yaml
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- sug: qcat-examples
- demultiplexing Oxford Nanopore reads from FASTQ files (examples)
Hämta qcat
| Arkitektur | Paketstorlek | Installerad storlek | Filer |
|---|---|---|---|
| all | 30,5 kbyte | 269,0 kbyte | [filförteckning] |