Paket: pal2nal (14.1-3)

Länkar för pal2nal

Debianresurser:

Hämta källkodspaketet pal2nal:

Ansvariga:

Debian Med Packaging Team (QA-sida, E-postarkiv)
Pjotr Prins (QA-sida)
Steffen Moeller (QA-sida)

Externa resurser:

Hemsida [www.bork.embl.de]

Liknande paket:

converts proteins to genomic DNA alignment

PAL2NAL is a program that converts a multiple sequence alignment of proteins and the corresponding DNA (or mRNA) sequences into a codon-based DNA alignment. The program automatically assigns the corresponding codon sequence even if the input DNA sequence has mismatches with the input protein sequence, or contains UTRs, polyA tails. It can also deal with frame shifts in the input alignment, which is suitable for the analysis of pseudogenes. The resulting codon-based DNA alignment can further be subjected to the calculation of synonymous (Ks) and non-synonymous (Ka) substitution rates.

Andra paket besläktade med pal2nal

beror

rekommenderar

föreslår

enhances

rec: paml

Phylogenetic Analysis by Maximum Likelihood (PAML)

Hämta pal2nal

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Arkitektur	Paketstorlek	Installerad storlek	Filer
all	17,3 kbyte	91,0 kbyte	[filförteckning]