Paket: smrtanalysis-dev (0~20210112) [debports]

[ Källkod:  ]

develepment libraries for smrtanalysis

SMRT® Analysis is a powerful, open-source bioinformatics software suite available for analysis of DNA sequencing data from Pacific Biosciences’ SMRT technology. Users can choose from a variety of analysis protocols that utilize PacBio® and third-party tools. Analysis protocols include de novo genome assembly, cDNA mapping, DNA base-modification detection, and long-amplicon analysis to determine phased consensus sequences.

This is a metapackage that depends on the SMRTAnalysis development tools.

Andra paket besläktade med smrtanalysis-dev

• dep: libpbbam-dev

  Pacific Biosciences binary alignment/map (BAM) library (headers)

• dep: libpbseq-dev

  library for analyzing PacBio sequencing data (development files)

• dep: python3-pbcommand

  common command-line interface for Pacific Biosciences analysis modules

• dep: python3-pbconsensuscore

  algorithms for PacBio multiple sequence consensus -- Python 3

• dep: python3-pbcore

  Python 3 library for processing PacBio data files

• sug: python-kineticstools

  detection of DNA modifications (Python 2 library)

• sug: python-pbalign

  Paketet inte tillgängligt

• sug: python-pbgenomicconsensus

  Paketet inte tillgängligt

• sug: python-pbh5tools

  Paketet inte tillgängligt

Hämta smrtanalysis-dev

Hämtningar för alla tillgängliga arkitekturer

Arkitektur	Paketstorlek	Installerad storlek	Filer
alpha (inofficiell anpassning)	3,0 kbyte	9,0 kbyte	[filförteckning]