Paket: poretools (0.6.0+dfsg-7)

[ Källkod: poretools  ]

toolkit for nanopore nucleotide sequencing data

poretools is a flexible toolkit for exploring datasets generated by nanopore sequencing devices from MinION for the purposes of quality control and downstream analysis. Poretools operates directly on the native FAST5 (a variant of the HDF5 standard) file format produced by ONT and provides a wealth of format conversion utilities and data exploration and visualization tools.

Andra paket besläktade med poretools

• dep: python3

  interactive high-level object-oriented language (default python3 version)

• dep: python3-h5py (>= 2.2.0)

  general-purpose Python interface to hdf5

• dep: python3-matplotlib

  Python based plotting system in a style similar to Matlab

• dep: python3-pandas

  data structures for "relational" or "labeled" data

• dep: python3-seaborn

  statistical visualization library for Python3

Hämta poretools

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Arkitektur	Paketstorlek	Installerad storlek	Filer
all	19,3 kbyte	116,0 kbyte	[filförteckning]