Paket: sspace (2.1.1+dfsg-4)

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Hemsida [github.com]

Liknande paket:

scaffolding pre-assembled contigs after extension

SSAKE-based Scaffolding of Pre-Assembled Contigs after Extension (SSPACE) is a script able to extend and scaffold pre-assembled contigs using one or more mate pairs or paired-end libraries, or even a combination.

SSPACE is built based on SSAKE. Code of SSAKE is changed to be able to extend and scaffold pre-assembled contigs for multiple paired reads libraries.

This is the free 'basic' version of SSPACE. The non-free 'standard' version is available directly from Baseclear.

Andra paket besläktade med sspace

beror

rekommenderar

föreslår

enhances

dep: bowtie

Ultrafast memory-efficient short read aligner
dep: perl

Larry Wall's Practical Extraction and Report Language
dep: python

interactive high-level object-oriented language (Python2 version)

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Arkitektur	Paketstorlek	Installerad storlek	Filer
all	1.308,3 kbyte	1.445,0 kbyte	[filförteckning]