Paket: pbhoney (15.8.24+dfsg-3)

[ Källkod: pbsuite  ]

genomic structural variation discovery

PBHoney is an implementation of two variant-identification approaches designed to exploit the high mappability of long reads (i.e., greater than 10,000 bp). PBHoney considers both intra-read discordance and soft-clipped tails of long reads to identify structural variants.

PBHoney is part of the PBSuite.

Andra paket besläktade med pbhoney

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• dep: python-numpy

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• dep: python-pbbanana (= 15.8.24+dfsg-3)

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• dep: python-pysam (>= 0.8.0)

  interface for the SAM/BAM sequence alignment and mapping format (Python 2)

• dep: samtools

  processing sequence alignments in SAM, BAM and CRAM formats

• rec: pbdagcon

  sequence consensus using directed acyclic graphs

Hämta pbhoney

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Arkitektur	Paketstorlek	Installerad storlek	Filer
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