Paket: poretools (0.6.0+dfsg-3)

[ Källkod: poretools  ]

toolkit for nanopore nucleotide sequencing data

poretools is a flexible toolkit for exploring datasets generated by nanopore sequencing devices from MinION for the purposes of quality control and downstream analysis. Poretools operates directly on the native FAST5 (a variant of the HDF5 standard) file format produced by ONT and provides a wealth of format conversion utilities and data exploration and visualization tools.

Andra paket besläktade med poretools

• dep: python

  interactive high-level object-oriented language (Python2 version)

• dep: python-h5py

  general-purpose Python interface to hdf5 (Python 2)

• dep: python-matplotlib

  Python based plotting system in a style similar to Matlab

• dep: python-pandas

  data structures for "relational" or "labeled" data

• dep: python-pkg-resources

  Package Discovery and Resource Access using pkg_resources

• dep: python-seaborn

  statistical visualization library for Python

Hämta poretools

Hämtningar för alla tillgängliga arkitekturer

Arkitektur	Paketstorlek	Installerad storlek	Filer
all	18,7 kbyte	116,0 kbyte	[filförteckning]