Paket: maqview (0.2.5-10)

[ Källkod: maqview  ]

graphical read alignment viewer for short gene sequences

Maqview is graphical read alignment viewer. It is specifically designed for the Maq alignment file and allows you to see the mismatches, base qualities and mapping qualities. Maqview is nothing fancy as Consed or GAP, but just a simple viewer for you to see what happens in a particular region.

In comparison to tgap-maq, the text-based read alignment viewer written by James Bonfield, Maqview is faster and takes up much less memory and disk space in indexing. This is possibly because tgap aims to be a general-purpose viewer but Maqview fully makes use of the fact that a Maq alignment file has already been sorted. Maqview is also efficient in viewing and provides a command-line tool to quickly retrieve any region in an Maq alignment file.

Andra paket besläktade med maqview

• dep: freeglut3 (>= 2.8.1)

  OpenGL Utility Toolkit

• dep: libc6 (>= 2.17)

  GNU C-bibliotek: Delade bibliotek
  också ett virtuellt paket som tillhandahålls av libc6-udeb

• dep: libgl1

  Vendor neutral GL dispatch library -- legacy GL support

• dep: libglu1-mesa

  Mesa OpenGL utility library (GLU)

  eller libglu1

  virtuellt paket som tillhandahålls av libglu1-mesa

• dep: libstdc++6 (>= 5)

  GNU standardbibliotek v3 för C++

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Hämtningar för alla tillgängliga arkitekturer

Arkitektur	Paketstorlek	Installerad storlek	Filer
ppc64el	125,9 kbyte	1.146,0 kbyte	[filförteckning]