Paket: ncbi-entrez-direct (14.6.20210224+dfsg-4 och andra)

[ Källkod: ncbi-entrez-direct  ]

NCBI Entrez utilities on the command line

Entrez Direct (EDirect) is an advanced method for accessing NCBI's set of interconnected databases (publication, sequence, structure, gene, variation, expression, etc.) from a terminal window or script. Functions take search terms from command-line arguments. Individual operations are combined to build multi-step queries. Record retrieval and formatting normally complete the process.

EDirect also provides an argument-driven function that simplifies the extraction of data from document summaries or other results that are returned in structured XML format. This can eliminate the need for writing custom software to answer ad hoc questions. Queries can move seamlessly between EDirect commands and UNIX utilities or scripts to perform actions that cannot be accomplished entirely within Entrez.

Andra paket besläktade med ncbi-entrez-direct

• dep: curl

  command line tool for transferring data with URL syntax

  eller wget

  retrieves files from the web

• dep: libc6 (>= 2.4)

  GNU C-bibliotek: Delade bibliotek
  också ett virtuellt paket som tillhandahålls av libc6-udeb

• dep: libwww-perl

  simple and consistent interface to the world-wide web

• dep: libxml-simple-perl

  Perl module for reading and writing XML

• dep: perl

  Larry Wall's Practical Extraction and Report Language

• sug: curl

  command line tool for transferring data with URL syntax

• sug: libxml2-utils

  XML utilities

• sug: python3

  interactive high-level object-oriented language (default python3 version)

Hämta ncbi-entrez-direct

Hämtningar för alla tillgängliga arkitekturer

Arkitektur	Version	Paketstorlek	Installerad storlek	Filer
armhf	14.6.20210224+dfsg-4+b1	1.801,7 kbyte	8.991,0 kbyte	[filförteckning]