[ Källkod: plip ]
Paket: plip (2.1.7+dfsg-1)
Länkar för plip
Debianresurser:
Hämta källkodspaketet plip:
Ansvariga:
- Debian Med Packaging Team (QA-sida, E-postarkiv)
- Alexandre Mestiashvili (QA-sida)
- Nilesh Patra (QA-sida)
Externa resurser:
- Hemsida [projects.biotec.tu-dresden.de]
Liknande paket:
fully automated protein-ligand interaction profiler
The Protein-Ligand Interaction Profiler (PLIP) is a tool to analyze and visualize protein-ligand interactions in PDB files.
Features include:
* Detection of eight different types of noncovalent interactions * Automatic detection of relevant ligands in a PDB file * Direct download of PDB structures from wwPDB server if valid PDB ID is given * Processing of custom PDB files containing protein-ligand complexes (e.g. from docking) * No need for special preparation of a PDB file, works out of the box * Atom-level interaction reports in rST and XML formats for easy parsing * Generation of PyMOL session files (.pse) for each pairing, enabling easy preparation of images for publications and talks * Rendering of preview image for each ligand and its interactions with the protein
Andra paket besläktade med plip
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- dep: python3
- interactive high-level object-oriented language (default python3 version)
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- dep: python3-lxml
- pythonic binding for the libxml2 and libxslt libraries
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- dep: python3-numpy
- Fast array facility to the Python 3 language
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- dep: python3-openbabel
- Chemical toolbox library (Python bindings)
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- rec: pymol
- Molecular Graphics System
Hämta plip
Arkitektur | Paketstorlek | Installerad storlek | Filer |
---|---|---|---|
all | 80,6 kbyte | 376,0 kbyte | [filförteckning] |