Paket: bppsuite (2.4.1-6)

[ Källkod: bppsuite  ]

Bio++ program suite

The Bio++ Program Suite is a package of programs using the Bio++ libraries and dedicated to Phylogenetics and Molecular Evolution. All programs are independent, but can be combined to perform rather complex analyses. These programs use the interface helper tools of the libraries, and hence share the same syntax. They also have several options in common, which may also be shared by third-party software.

The following programs are included:

 - BppML for maximum likelihood analysis,
 - BppSeqGen for sequences simulation,
 - BppAncestor for ancestral states reconstruction,
 - BppDist for distance methods,
 - BppPars for parsimony analysis,
 - BppSeqMan for file conversion and sequence manipulation,
 - BppConsense for building consensus tree and computing
   bootstrap values,
 - BppReRoot for tree rerooting.
 - BppTreeDraw for tree drawing.
 - BppAlnScore for comparing alignments and computing alignment scores.
 - BppMixedLikelihoods for computing site per site likelihoods of
   components of mixture models.
 - BppPopGen for population genetics analyses.

Andra paket besläktade med bppsuite

• dep: libbpp-core4 (>= 2.4.1)

  Bio++ Core library

• dep: libbpp-phyl12 (>= 2.4.1)

  Bio++ Phylogenetic library

• dep: libbpp-popgen8 (>= 2.4.1)

  Bio++ Population Genetics library

• dep: libbpp-seq12 (>= 2.4.1)

  Bio++ Sequence library

• dep: libc6 (>= 2.34)

  GNU C-bibliotek: Delade bibliotek
  också ett virtuellt paket som tillhandahålls av libc6-udeb

• dep: libgcc-s1 (>= 3.0)

  GCC stödbibliotek

• dep: libstdc++6 (>= 11)

  GNU standardbibliotek v3 för C++

• sug: bppsuite-examples

  Examples for Bio++ program suite

Hämta bppsuite

Hämtningar för alla tillgängliga arkitekturer

Arkitektur	Paketstorlek	Installerad storlek	Filer
mips64el	335,6 kbyte	2.604,0 kbyte	[filförteckning]