Paket: macsyfinder (2.0-2 och andra)

[ Källkod: macsyfinder  ]

detection of macromolecular systems in protein datasets

MacSyFinder is a program to model and detect macromolecular systems, genetic pathways... in protein datasets. In prokaryotes, these systems have often evolutionarily conserved properties: they are made of conserved components, and are encoded in compact loci (conserved genetic architecture). The user models these systems with MacSyFinder to reflect these conserved features, and to allow their efficient detection

This package presents the Open Source Java API to biological databases and a series of mostly sequence-based algorithms.

Andra paket besläktade med macsyfinder

• dep: hmmer

  profile hidden Markov models for protein sequence analysis

• dep: libjs-jquery

  JavaScript library for dynamic web applications

• dep: libjs-sphinxdoc (>= 5.2)

  JavaScript support for Sphinx documentation

• dep: libjs-underscore

  JavaScript's functional programming helper library

• dep: ncbi-blast+

  next generation suite of BLAST sequence search tools

• dep: python3

  interactive high-level object-oriented language (default python3 version)

• dep: python3-certifi

  root certificates for validating SSL certs and verifying TLS hosts (python3)

• dep: python3-colorama

  Cross-platform colored terminal text in Python - Python 3.x

• dep: python3-colorlog

  formatter to use with the logging module of Python 3

• dep: python3-networkx

  tool to create, manipulate and study complex networks (Python3)

• dep: python3-packaging

  core utilities for python3 packages

• dep: python3-pandas

  data structures for "relational" or "labeled" data

• dep: python3-yaml

  YAML parser and emitter for Python3

• dep: sphinx-rtd-theme-common (>= 1.2.0+dfsg)

  sphinx theme from readthedocs.org (common files)

Hämta macsyfinder

Hämtningar för alla tillgängliga arkitekturer

Arkitektur	Version	Paketstorlek	Installerad storlek	Filer
i386	2.0-2+b1	11.810,5 kbyte	31.261,0 kbyte	[filförteckning]