Paket: bowtie2-examples (2.5.0-3)

[ Källkod: bowtie2  ]

Examples for bowtie2

An ultrafast and memory-efficient tool for aligning sequencing reads to long reference sequences. It is particularly good at aligning reads of about 50 up to 100s or 1,000s of characters, and particularly good at aligning to relatively long (e.g. mammalian) genomes.

Bowtie 2 indexes the genome with an FM Index to keep its memory footprint small: for the human genome, its memory footprint is typically around 3.2 GB. Bowtie 2 supports gapped, local, and paired-end alignment modes

This package provides some example data to work with bowtie2.

Märken: Field: Biologi, Bioinformatics, Role: Examples

Andra paket besläktade med bowtie2-examples

• rec: bowtie2

  ultrafast memory-efficient short read aligner

• enh: bowtie2

  ultrafast memory-efficient short read aligner

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