Paket: abyss (2.3.5+dfsg-2)

[ Källkod: abyss  ]

de novo, parallel, sequence assembler for short reads

ABySS is a de novo, parallel, sequence assembler that is designed for short reads. It may be used to assemble genome or transcriptome sequence data. Parallelization is achieved using MPI, OpenMP and pthread.

Märken: Field: Biologi, Implemented in: C, User Interface: Command Line, Role: Program

Andra paket besläktade med abyss

• dep: bsdextrautils

  extra utilities from 4.4BSD-Lite

• dep: libc6 (>= 2.34)

  GNU C-bibliotek: Delade bibliotek
  också ett virtuellt paket som tillhandahålls av libc6-udeb

• dep: libgcc-s1 (>= 3.0)

  GCC stödbibliotek

• dep: libgomp1 (>= 4.9)

  GCC OpenMP (GOMP) support library

• dep: libopenmpi3 (>= 4.1.4)

  high performance message passing library -- shared library

• dep: libsqlite3-0 (>= 3.5.9)

  SQLite 3 shared library

• dep: libstdc++6 (>= 12)

  GNU standardbibliotek v3 för C++

• dep: make

  utility for directing compilation

• dep: openmpi-bin

  high performance message passing library -- binaries

• dep: openmpi-common

  high performance message passing library -- common files

• dep: perl

  Larry Wall's Practical Extraction and Report Language

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Hämtningar för alla tillgängliga arkitekturer

Arkitektur	Paketstorlek	Installerad storlek	Filer
arm64	2.893,9 kbyte	10.163,0 kbyte	[filförteckning]