Balík: libbio-asn1-entrezgene-perl (1.730-3)

[ Zdroj: libbio-asn1-entrezgene-perl  ]

parser for NCBI Entrez Gene and NCBI Sequence records

Bio::ASN1::EntrezGene and Bio::ASN1::Sequence are regular expression-based parsers for NCBI Entrez Gene genome databases (<http://www.ncbi.nih.gov/entrez/query.fcgi?db=gene>).

They parse ASN.1-formatted Entrez Gene records and NCBI sequences, returning data structures that contain all data items from the gene records or the sequence records.

The parser will report error & line number if input data does not conform to the NCBI Entrez Gene genome or NCBI Sequence annotation file format.

Bio::ASN1::Sequence is basically a modified version of the high-performance Bio::ASN1::EntrezGene parser. However this standalone module exists since it is more efficient to keep Sequence-specific code out of EntrezGene.pm.

Značky: Software Development: Perl Development, Knižnice, Pole: field::biology, field::biology:bioinformatics, Implementované v: implemented-in::perl, interface::commandline, Role: Program, Supports Format: Plain Text

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• dep: libbio-cluster-perl

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• dep: libbio-perl-perl

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• dep: perl

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