Zdrojový balík: bioperl-run (1.7.2-4)
Odkazy pre bioperl-run
Zdroje Debian:
Správcovia:
Externé zdroje:
Ostatné balíky súvisiace s balíkom bioperl-run
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- adep:
debhelper
(>= 11~)
- pomocné programy pre debian/rules
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- idep:
perl
- Practical Extraction and Report Language od Larryho Walla
-
- idep:
libmodule-build-perl
- platforma na zostavovanie a inštalovanie modulov jazyka Perl
-
- idep:
bioperl
- nástroje jazyka Perl na výpočtovú molekulárnu biológiu
-
- idep:
libalgorithm-diff-perl
- modul na nájdenie rozdielov medzi súbormi
-
- idep:
libipc-run-perl
- modul jazyka Perl na spúšťanie procesov
-
- idep:
libio-string-perl
- emulácia rozhrania IO::File pre reťazce v jadre
-
- idep:
libxml-twig-perl
- modul Perlu na spracovanie obrovských XML dokumentov v režime stromu
-
- idep:
libtest-most-perl
- Perl module with the most commonly needed test functions and features
-
- idep:
libarray-compare-perl
- Perl module to easily compare arrays
-
- idep:
libtree-dagnode-perl
- Perl (super)class for representing nodes in a tree
-
- idep:
amap-align
- Protein multiple alignment by sequence annealing
-
- idep:
bedtools
- suite of utilities for comparing genomic features
-
- idep:
blast2
- prechodový fiktívny balík na ncbi-blast+-legacy
-
- idep:
bowtie
- Ultrafast memory-efficient short read aligner
-
- idep:
bwa
- Burrows-Wheeler Aligner
-
- idep:
clustalw
- globálne viacnásobné zarovnávanie sekvencií nukleotidov alebo peptidov
-
- idep:
emboss
- európsky balík otvoreného softvéru pre molekulárnu biológiu
-
- idep:
exonerate
- generic tool for pairwise sequence comparison
-
- idep:
hmmer
- profile hidden Markov models for protein sequence analysis
-
- idep:
hyphy-mpi
- Hypothesis testing using Phylogenies (MPI version)
-
- idep:
infernal
- inference of RNA secondary structural alignments
-
- idep:
kalign
- Global and progressive multiple sequence alignment
-
- idep:
maq
- maps short fixed-length polymorphic DNA sequence reads to reference sequences
-
- idep:
mafft
- Multiple alignment program for amino acid or nucleotide sequences
-
- idep:
muscle
- Multiple alignment program of protein sequences
-
- idep:
ncoils
- coiled coil secondary structure prediction
-
- idep:
phylip
- package of programs for inferring phylogenies
-
- idep:
phyml
- Phylogenetic estimation using Maximum Likelihood
-
- idep:
primer3
- tool to design flanking oligo nucleotides for DNA amplification
-
- idep:
probcons
- PROBabilistic CONSistency-based multiple sequence alignment
-
- idep:
raxml
- Randomized Axelerated Maximum Likelihood of phylogenetic trees
-
- idep:
samtools
- processing sequence alignments in SAM, BAM and CRAM formats
-
- idep:
sim4
- tool for aligning cDNA and genomic DNA
-
- idep:
t-coffee
- Multiple Sequence Alignment
-
- idep:
tigr-glimmer
- Gene detection in archea and bacteria
-
- idep:
wise
- comparison of biopolymers, like DNA and protein sequences
-
- idep:
libwww-perl
- jednoduché a konzistentné rozhranie k www
