Balík: r-bioc-mofa2 (1.16.0+ds-4)

[ Zdroj: r-bioc-mofa2  ]

Multi-Omics Factor Analysis v2

The MOFA2 package contains a collection of tools for training and analysing multi-omic factor analysis (MOFA). MOFA is a probabilistic factor model that aims to identify principal axes of variation from data sets that can comprise multiple omic layers and/or groups of samples. Additional time or space information on the samples can be incorporated using the MEFISTO framework, which is part of MOFA2. Downstream analysis functions to inspect molecular features underlying each factor, vizualisation, imputation etc are available.

Ostatné balíky súvisiace s balíkom r-bioc-mofa2

• dep: r-api-4.0

  virtuálny balík poskytovaný balíkom r-base-core

• dep: r-api-bioc-3.20

  virtuálny balík poskytovaný balíkom r-bioc-biocgenerics

• dep: r-bioc-delayedarray

  BioConductor delayed operations on array-like objects

• dep: r-bioc-hdf5array

  HDF5 backend for DelayedArray objects

• dep: r-bioc-rhdf5

  BioConductor HDF5 interface to R

• dep: r-cran-corrplot

  Visualization of a Correlation Matrix

• dep: r-cran-cowplot

  GNU R streamlined plot theme and plot annotations for 'ggplot2'

• dep: r-cran-dplyr

  GNU R grammar of data manipulation

• dep: r-cran-forcats

  GNU R package for working with categorical variables (factors)

• dep: r-cran-ggplot2

  implementácia Gramatiky grafiky

• dep: r-cran-ggrepel

  auto-position non-overlapping text labels in plots

• dep: r-cran-magrittr

  GNU R - operátor dopredná rúra

• dep: r-cran-pheatmap

  GNU R package to create pretty heatmaps

• dep: r-cran-rcolorbrewer

  balík GNU R poskytujúci vhodné palety farieb

• dep: r-cran-reshape2

  flexibilná zmena tvaru dát - reboot balíka reshape

• dep: r-cran-reticulate

  R interface to Python modules, classes, and functions

• dep: r-cran-rtsne

  GNU R T-Distributed Stochastic Neighbor Embedding using a Barnes-Hut

• dep: r-cran-stringi

  GNU R - spracovanie reťazcov znakov

• dep: r-cran-tidyr

  GNU R package to easily tidy data

• dep: r-cran-uwot

  GNU R uniform manifold approximation and projection (UMAP)

• sug: r-bioc-basilisk

  freezing Python dependencies inside Bioconductor packages

• sug: r-bioc-biocstyle

  standard styles for vignettes and other Bioconductor documents

• sug: r-bioc-multiassayexperiment

  Software for integrating multi-omics experiments in BioConductor

• sug: r-bioc-singlecellexperiment

  S4 Classes for Single Cell Data

• sug: r-bioc-summarizedexperiment

  BioConductor assay container

• sug: r-cran-data.table

  GNU R - rozšírenie Data.frame

• sug: r-cran-foreach

  GNU R podpora cyklov foreach

• sug: r-cran-ggally

  GNU R extension to r-cran-ggplot2

• sug: r-cran-ggpubr

  GNU R ggplot2 based publication ready plots

• sug: r-cran-ggrastr

  Bioconductor rasterize layers for 'ggplot2'

• sug: r-cran-knitr

  balík GNU R na dynamickú tvorbu zostáv pomocou Literate Programming

• sug: r-cran-markdown

  balík GNU R poskytujúci väzby knižnice Sundown na vykresľovanie Markdown pre jazyk R

• sug: r-cran-matrix

  balík tried GNU R pre husté a riedke matice

• sug: r-cran-mvtnorm

  balík GNU R na výpočet viacrozmerných normálnych a T rozdelení

• sug: r-cran-psych

  GNU R procedures for psychological, psychometric, and personality research

• sug: r-cran-rmarkdown

  convert R markdown documents into a variety of formats

• sug: r-cran-seurat

  Tools for Single Cell Genomics

• sug: r-cran-seuratobject

  GNU R data structures for single cell data

• sug: r-cran-testthat

  GNU R testsuite

• sug: r-cran-tidyverse

  Easily Install and Load the 'Tidyverse'

Stiahnuť r-bioc-mofa2

Stiahnuť pre všetky dostupné architektúry

Architektúra	Veľkosť balíka	Nainštalovaná veľkosť	Súbory
all	2,407.9 kB	3,101.0 kB	[zoznam súborov]