Balík: r-bioc-biomart (2.60.1+dfsg-1)

[ Zdroj: r-bioc-biomart  ]

GNU R Interface to BioMart databases (Ensembl, COSMIC, Wormbase and Gramene)

In recent years a wealth of biological data has become available in public data repositories. Easy access to these valuable data resources and firm integration with data analysis is needed for comprehensive bioinformatics data analysis. biomaRt provides an interface to a growing collection of databases implementing the BioMart software suite (http://www.biomart.org). The package enables retrieval of large amounts of data in a uniform way without the need to know the underlying database schemas or write complex SQL queries. Examples of BioMart databases are Ensembl, COSMIC, Uniprot, HGNC, Gramene, Wormbase and dbSNP mapped to Ensembl. These major databases give biomaRt users direct access to a diverse set of data and enable a wide range of powerful online queries from gene annotation to database mining.

Ostatné balíky súvisiace s balíkom r-bioc-biomart

• dep: r-api-4.0

  virtuálny balík poskytovaný balíkom r-base-core

• dep: r-api-bioc-3.19

  virtuálny balík poskytovaný balíkom r-bioc-biocgenerics

• dep: r-bioc-annotationdbi (>= 1.66.0)

  GNU R Annotation Database Interface for BioConductor

• dep: r-bioc-biocfilecache (>= 2.12.0)

  GNU R management of files across sessions

• dep: r-cran-digest

  GNU R package for 'hash digest' of R data structures

• dep: r-cran-httr2

  perform HTTP requests and process the responses in GNU R

• dep: r-cran-progress

  GNU R terminal progress bars

• dep: r-cran-rappdirs

  GNU R application directories

• dep: r-cran-stringr

  uľahčenie práce s reťazcami

• dep: r-cran-xml2

  GNU R XML parser

• sug: r-bioc-biocstyle (>= 2.32.1)

  standard styles for vignettes and other Bioconductor documents

• sug: r-cran-httptest2

  Test Helpers for 'httr2'

• sug: r-cran-knitr

  balík GNU R na dynamickú tvorbu zostáv pomocou Literate Programming

• sug: r-cran-mockery

  mocking library for GNU R

• sug: r-cran-rmarkdown

  convert R markdown documents into a variety of formats

• sug: r-cran-testthat

  GNU R testsuite

Stiahnuť r-bioc-biomart

Stiahnuť pre všetky dostupné architektúry

Architektúra	Veľkosť balíka	Nainštalovaná veľkosť	Súbory
all	441.3 kB	632.0 kB	[zoznam súborov]