Balík: insilicoseq (2.0.1-1)

[ Zdroj: insilicoseq  ]

sequencing simulator producing realistic Illumina reads

Primarily intended for simulating metagenomic samples, it can also be used to produce sequencing data from a single genome.

InSilicoSeq is written in Python, and use kernel density estimators to model the read quality of real sequencing data.

InSilicoSeq support substitution, insertion and deletion errors. If you don't have the use for insertion and deletion error a basic error model is provided.

Ostatné balíky súvisiace s balíkom insilicoseq

• dep: python3

  interactive high-level object-oriented language (default python3 version)

• dep: python3-biopython

  Python3 library for bioinformatics

• dep: python3-numpy

  Fast array facility to the Python language (Python 3)

• dep: python3-pysam

  interface for the SAM/BAM sequence alignment and mapping format (Python 3)

• dep: python3-requests

  elegantná a jednoduchá knižnica HTTP pre Python 3 pre ľudí

• dep: python3-scipy

  vedecké nástroje pre Python 3

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Architektúra	Veľkosť balíka	Nainštalovaná veľkosť	Súbory
all	4,135.0 kB	9,076.0 kB	[zoznam súborov]