Balík: r-bioc-variantannotation (1.48.1-1 a iné) [debports]

[ Zdroj:  ]

BioConductor annotation of genetic variants

This BioConductor package provides R functions to annotate variants, compute amino acid coding changess and to predict coding outcomes.

Ostatné balíky súvisiace s balíkom r-bioc-variantannotation

• dep: libbz2-1.0

  kvalitná knižnica na komprimáciu súborov s triedením blokov - dynamická knižnica

• dep: libc6.1 (>= 2.37)

  knižnica GNU C - zdieľané knižnice
  tiež virtuálny balík poskytovaný balíkom libc6.1-udeb

• dep: libcurl4 (>= 7.18.0)

  jednoducho použiteľná klientská knižnica na prenos URL (OpenSSL)

• dep: liblzma5 (>= 5.1.1alpha+20120614)

  komprimačná knižnica formátu XZ

• dep: r-api-4.0

  virtuálny balík poskytovaný balíkom r-base-core

• dep: r-api-bioc-3.18

  Balík nie je dostupný

• dep: r-bioc-annotationdbi (>= 1.27.9)

  GNU R Annotation Database Interface for BioConductor

• dep: r-bioc-biobase

  base functions for Bioconductor

• dep: r-bioc-biocgenerics (>= 0.37.0)

  generic functions for Bioconductor

• dep: r-bioc-biostrings (>= 2.57.2)

  GNU R string objects representing biological sequences

• dep: r-bioc-bsgenome (>= 1.47.3)

  BioConductor infrastructure for Biostrings-based genome data packages

• dep: r-bioc-genomeinfodb (>= 1.15.2)

  BioConductor utilities for manipulating chromosome identifiers

• dep: r-bioc-genomicfeatures (>= 1.31.3)

  GNU R tools for making and manipulating transcript centric annotations

• dep: r-bioc-genomicranges (>= 1.41.5)

  BioConductor representation and manipulation of genomic intervals

• dep: r-bioc-iranges (>= 2.23.9)

  GNU R low-level containers for storing sets of integer ranges

• dep: r-bioc-matrixgenerics

  S4 Generic Summary Statistic Functions that Operate on Matrix-Like Objects

• dep: r-bioc-rhtslib (>= 1.99.3)

  HTSlib high-throughput sequencing library as GNU R package

• dep: r-bioc-rsamtools (>= 1.99.0)

  GNU R binary alignment (BAM), variant call (BCF), or tabix file import

• dep: r-bioc-rtracklayer (>= 1.39.7)

  GNU R interface to genome browsers and their annotation tracks

• dep: r-bioc-s4vectors (>= 0.27.12)

  BioConductor S4 implementation of vectors and lists

• dep: r-bioc-summarizedexperiment (>= 1.19.5)

  BioConductor assay container

• dep: r-bioc-xvector (>= 0.29.2)

  BioConductor representation and manpulation of external sequences

• dep: r-bioc-zlibbioc

  (Virtual) zlibbioc Bioconductor package

• dep: r-cran-dbi

  balík GNU R poskytujúci všeobecné databázové rozhranie

• dep: zlib1g (>= 1:1.2.3.3)

  komprimačná knižnica - dynamická verzia

• sug: r-bioc-annotationhub

  GNU R client to access AnnotationHub resources

• sug: r-bioc-biocstyle

  standard styles for vignettes and other Bioconductor documents

• sug: r-bioc-snpstats

  BioConductor SnpMatrix and XSnpMatrix classes and methods

• sug: r-cran-ggplot2

  implementácia Gramatiky grafiky

• sug: r-cran-knitr

  balík GNU R na dynamickú tvorbu zostáv pomocou Literate Programming

• sug: r-cran-runit

  GNU R package providing unit testing framework

Stiahnuť r-bioc-variantannotation

Stiahnuť pre všetky dostupné architektúry

Architektúra	Verzia	Veľkosť balíka	Nainštalovaná veľkosť	Súbory
ia64 (neoficiálny port)	1.48.1-1+b1	3,527.1 kB	6,992.0 kB	[zoznam súborov]