Balík: sibelia (3.0.7+dfsg-3) [debports]

[ Zdroj:  ]

comparative genomics tool

Sibelia (Synteny Block ExpLoration tool) is a comparative genomics tool: It assists biologists in analysing the genomic variations that correlate with pathogens, or the genomic changes that help microorganisms adapt in different environments. Sibelia will also be helpful for the evolutionary and genome rearrangement studies for multiple strains of microorganisms.

Sibelia is useful in finding:

 1) shared regions,
 2) regions that present in one group of genomes but not in others,
 3) rearrangements that transform one genome to other genomes.

Ostatné balíky súvisiace s balíkom sibelia

• dep: lagan

  highly parametrizable pairwise global genome sequence aligner

• dep: libc6 (>= 2.11)

  knižnica GNU C - zdieľané knižnice
  tiež virtuálny balík poskytovaný balíkom libc6-udeb

• dep: libdivsufsort3 (>= 2.0.1)

  fast suffix array construction

• dep: libgcc-s4 (>= 4.1.1)

  podporná knižnica GCC

• dep: libstdc++6 (>= 9)

  štandardná knižnica C++ GNU v3

• dep: python3

  interactive high-level object-oriented language (default python3 version)

• sug: sibelia-examples

  comparative genomics tool (example data)

Stiahnuť sibelia

Stiahnuť pre všetky dostupné architektúry

Architektúra	Veľkosť balíka	Nainštalovaná veľkosť	Súbory
hppa (neoficiálny port)	293.4 kB	1,075.0 kB	[zoznam súborov]