Balík: r-bioc-variantannotation (1.28.10-1)

[ Zdroj: r-bioc-variantannotation  ]

BioConductor annotation of genetic variants

This BioConductor package provides R functions to annotate variants, compute amino acid coding changess and to predict coding outcomes.

Ostatné balíky súvisiace s balíkom r-bioc-variantannotation

• dep: libc6 (>= 2.15)

  knižnica GNU C - zdieľané knižnice
  tiež virtuálny balík poskytovaný balíkom libc6-udeb

• dep: r-api-3.5

  virtuálny balík poskytovaný balíkom r-base-core

• dep: r-api-bioc-3.8

  virtuálny balík poskytovaný balíkom r-bioc-biocgenerics

• dep: r-base-core (>= 3.5.2-1)

  jadro GNU R na štatistické výpočty a grafický systém

• dep: r-bioc-annotationdbi (>= 1.27.9)

  GNU R Annotation Database Interface for BioConductor

• dep: r-bioc-biobase

  base functions for Bioconductor

• dep: r-bioc-biocgenerics (>= 0.15.3)

  generic functions for Bioconductor

• dep: r-bioc-biostrings (>= 2.47.6)

  GNU R string objects representing biological sequences

• dep: r-bioc-bsgenome (>= 1.47.3)

  BioConductor infrastructure for Biostrings-based genome data packages

• dep: r-bioc-genomeinfodb (>= 1.15.2)

  BioConductor utilities for manipulating chromosome identifiers

• dep: r-bioc-genomicfeatures (>= 1.31.3)

  GNU R tools for making and manipulating transcript centric annotations

• dep: r-bioc-genomicranges (>= 1.31.8)

  BioConductor representation and manipulation of genomic intervals

• dep: r-bioc-iranges (>= 2.13.13)

  GNU R low-level containers for storing sets of integer ranges

• dep: r-bioc-rsamtools (>= 1.33.6)

  GNU R binary alignment (BAM), variant call (BCF), or tabix file import

• dep: r-bioc-rtracklayer (>= 1.39.7)

  GNU R interface to genome browsers and their annotation tracks

• dep: r-bioc-s4vectors (>= 0.17.24)

  BioConductor S4 implementation of vectors and lists

• dep: r-bioc-summarizedexperiment (>= 1.9.9)

  BioConductor assay container

• dep: r-bioc-xvector (>= 0.19.7)

  BioConductor representation and manpulation of external sequences

• dep: r-bioc-zlibbioc

  (Virtual) zlibbioc Bioconductor package

• dep: r-cran-dbi

  balík GNU R poskytujúci všeobecné databázové rozhranie

• dep: zlib1g (>= 1:1.2.3.3)

  komprimačná knižnica - dynamická verzia

• rec: r-bioc-snpstats

  BioConductor SnpMatrix and XSnpMatrix classes and methods

• rec: r-cran-runit

  GNU R package providing unit testing framework

• sug: r-bioc-annotationhub

  GNU R client to access AnnotationHub resources

• sug: r-cran-ggplot2

  implementácia Gramatiky grafiky

Stiahnuť r-bioc-variantannotation

Stiahnuť pre všetky dostupné architektúry

Architektúra	Veľkosť balíka	Nainštalovaná veľkosť	Súbory
amd64	2,925.2 kB	4,043.0 kB	[zoznam súborov]